YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|145638471, gi...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.43
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLKLLRIFLV LICCILICVL GTIYSFIRFK NPSNVGIVAR WFGRLYPLFG LKVEHRIPQD  60
   61 QKQISRAIYI GNHQNNYDMV TISYMVQPRT VSVGKKSLIW IPFFGILYWV TGNIFLDREN 120
  121 RTKAHNTMSQ LARRINEDNL SIWMFPEGTR NRGRGLLPFK TGAFHTAISA GVPIIPVVCS 180
  181 TTHNKINLNR WDNGKVICEI MDPIDVSGYT KDNVRDLAAY CHDLMEKRIA ELDEEIAKGN 240
  241

Type	Start	End	Confidence
Signal Peptide	1	25	0.48
N-region	1	16
H-region	17	22
C-region	23	25
Cleavage Site	25	26
Non-Cytoplasmic	26	240	0.74