YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|145270561, gi...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.81
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MYKTTGLTHL INSTKYSLQG LKSAFKNETA FRHECFLACI LIPLTFFLGE TKIEIILMIS  60
   61 SVLLVMALEL LNSAVEAVVD RIGTERHELS GRAKDQGSAS VFIALCIVGI VWGGILFF

Type	Start	End	Confidence
Cytoplasmic	1	29	0.93
Transmembrane Helix	30	49	0.85
Non-Cytoplasmic	50	54	0.82
Transmembrane Helix	55	75	0.89
Cytoplasmic	76	95	0.86
Transmembrane Helix	96	116	0.93
Non-Cytoplasmic	117	118	0.81