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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|53732718
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.90
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDAVVLVVFT MKKAHSPLFP IFTFVLINLI ILSLSRLGLA VWQSERVSAV DGWLQLFLQG  60
   61 VRMDVVALCY LFGVPALLTT LFHSSKVWVK ILRLWLTFGS VFIIFMEIAT PAFIETYDYR 120
  121 PNRLFIEYLI YPKEVFSMLA EGHLSAVIFS LVFTILAAVI YWKISGWAVK NLRSMSWKLR 180
  181 PVIALLVVVI SFLGVRSSFQ HRGINPAMVA FSSDALVNSL VLNSGYSVIY AAQQFKDEEK 240
  241 SSEMYGKMDA DEMFRIVKAS RGRPESDYIS DKYPTLTKNV AAYQGKPKNI VILLQESLGA 300
  301 QFIGTLGGKP LSPNVDQLAK EGWLFENLYA TGTRSVRGIE ATTAGFTPTP ARAVVKLNNA 360
  361 QSGFFTIADL LHKQGYNTSF IYGGEKHFDN MASFFYGNGF KDIWDQQDYQ NPKFTGTWGV 420
  421 SDEDLFDKAN ETFTKLQNEG KPFFSLVFSS SNHDPFEYPD GKIELYEQPK ATRNNAAKYA 480
  481 DYALGHFFKM AKQSNYWKDT IFLIVADHDS RVGGASLVPI KHFHIPALIL GNGISPRRDS 540
  541 RLVSQIDMPT TLLSLAGVSG NYPMIGFDLT QDVNPDRAFM QYDQTQAMMK GNNDVVIQMP 600
  601 NKAAQGYHYD KSTETLTPKD VPDAMKKEAL AHALLGSYLY KNRLYSSGEN K

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle