YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|46128878
Protein type:	Transmembrane
Type Confidence:	0.55
Topology Confidence:	0.46
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLKLLRIFLV LICCILICVL GTIYSFIRFK NPSNVGIVAR WFGRLYPLFG LKVEHRIPQD  60
   61 QKQISRAIYI GNHQNNYDMV TISYMVQPRT VSVGKKSLIW IPFFGILYWV TGNIFLDREN 120
  121 RTKAHSTMSQ LARRINEDNL SIWMFPEGTR NRGRGLLPFK TGAFHAAISA GVPIIPVVCS 180
  181 TTHNKINLNR WDNGKVICEI MDPIDVSGYT KDNVRDLAAY CHDLMEKRIA ELDEEIAKGN 240
  241

Type	Start	End	Confidence
Cytoplasmic	1	6	0.46
Transmembrane Helix	7	26	0.53
Non-Cytoplasmic	27	240	0.70