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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|71905755, gi|...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.92
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGDFNNPEAD LDRFRFRIGF AAVTVLLAFG VLIGRFVWLQ VIQHDFYQTR AEDNRIALIP  60
   61 IVPNRGVITD RNGVVLAHNY SAFTLEITPS QAGDLEATID SLAEVIDIQP KDRKRFKRLL 120
  121 DEAKNFESIP IRTRLTDGEV AKFAAHRYRF PGVEVKARLF RQYPLANIAS HAIGYIGRIT 180
  181 ERDLKWIEES EKQANYKGTD HVGKTGLEQH YEFELHGETG YEEVEIDAGG RALRSLKRIP 240
  241 PVSGNNLALT LDAKLQEITE LAFGERKGSL VAIDPSTGGI LALVSNPTYD PNLFVDGITP 300
  301 DNWKELNEHP SKPMVNRAIN GAYPPGSTFK PFLALAALEM GKRTPNQTIN DPGYFNFGNH 360
  361 QFRDDKKGGH GSVDMYKSIV HSCDTYYYML ANDMGIDNIA KFMGSLGLGQ RTGVDLGKDD 420
  421 SGESKGVLPS QEWKKQRFKK PEQQRWYAGE TISIGIGQGY NAYTPIQLAQ ATATIANNGV 480
  481 MFRPHLVHYI IDTKTGEKRQ VEPKPIRDLN LRPQNIDVIR RAMVGVNKEG TGARAFAGAP 540
  541 YESAGKTGTA QVFSLKGAQY KEGGMKKELR DHALFIAYAP ADKPKIALAV LVENGGFGAQ 600
  601 SAAPIARMVI DYYLLGKLPG GAAKDDPAAI EEDSEE

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle