YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|71907655, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.93
Topology Confidence:	0.49
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNFALILFVL LVLTGILYAV DVLKFRKLRA KDAREPLWVE WGASFFPVIL IVFVLRSFLF  60
   61 EPFKIPSGSM IPTLLVGDFI LVNKFTYGIR LPVINKKVID FNSPQRGDVM VFRYPEDPSL 120
  121 DYIKRVVGLP GDTVAYQNKK LTINGQSVET QKIGDYLHPE RLYYSEQFLE KLGEVEHRAL 180
  181 NDTDAPAFVA DAARFPHREN CTYNATGVIC KVPLGHYFMM GDNRDNSRDS RAWGFVPEEN 240
  241 IVGKAFFIWL NFSDFSRIGS FR

Type	Start	End	Confidence
Non-Cytoplasmic	1	4	0.82
Transmembrane Helix	5	25	0.85
Cytoplasmic	26	36	0.88
Transmembrane Helix	37	59	0.85
Non-Cytoplasmic	60	67	0.83
Transmembrane Helix	68	87	0.49
Cytoplasmic	88	262	0.53