YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	LOLA_DECAR
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRMNIVQKIL SATCFALLPL LAHAGAVDQL HDFLKNTRTL KAEFSQAVIS RNGRKPQQSS  60
   61 GTIAISRPGK LRWEIVKPFP QLVVGDGEKI WIHDPELQQV TVRKAGQAIG SSPAALLSGN 120
  121 NDLEKNFTLK DAGEAEGMAW VDATPKAGDS GFEKVRLGFS GGDLRAMELF DSFGQTTQIR 180
  181 FSKIERNPAL PAATFKFTPP AGADVVGE

Type	Start	End	Confidence
Signal Peptide	1	24	0.99
N-region	1	15
H-region	16	21
C-region	22	24
Cleavage Site	24	25
Non-Cytoplasmic	25	208	0.99