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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|71909161, gi|...
Protein type: Transmembrane
Type Confidence: 0.97
Topology Confidence: 0.57
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGVVFNTLSV AEALVFRRTL LAIVVAINCL AICVGAYTLY DSRQLYDRQA EAESRNLARA  60
   61 LDENLAVSLG RVEVTLGSVV DRLEEELNRH ATLQEVSLAS FIKRAESHLG AHVRVRVSDE 120
  121 SGMVILGGDV VPGTTTWGGR SFFRQLKEHP ETGTLINDPV LGYVTKVHLV PVAARYRYPD 180
  181 GRFAGIVSVA VPVSYLSDQL AKLDYGPHGL AVLRDAKLNL ITRYPALNKP EGELGAPIYN 240
  241 KTLIAGIEDG KRSFFYHTQT TPDGVSRLIT YQRLSSMPFH LIVGLAHDDY LLPWYERLQQ 300
  301 TVIALVIFAF ATFALSLLLL GMLSSLRRQG EHAVALLKNA SDGVHILDRH GVIVEANDAF 360
  361 CALLGYSRQE VIGMAIGQWD SSVKDVDVEA MLAQRFQSPV PDQFETRHRR KDGSEFPAEV 420
  421 SFQPMVIEGV ELLYASSRDI SDRKRAELVL ARERSMYRTL IDTLPDLIWL KDADGVYLSC 480
  481 NRRFEQFFGT SEQEIVGKTD YDFVSKELAD FFREHDRKAM EKDGPSINEE EVPFASDGHR 540
  541 ELLETTKMSM RDASGKLIGV LGIGHDITAK RRSELELDGH RQHLQELVDS QTADLMVAKE 600
  601 VAETASVAKS AFLANMSHEI RTPMNAITGM VHILRNMGVT PPQSEKLDII ENASKHLLGI 660
  661 INDVLDLSKI EAGKFTLEDV PLSIRALFGN VASMLGPKVR EKGLVLNIEA DDVPRNLRGD 720
  721 PTRLQQALLN FAGNALKFTE RGHITLRARI LEETELSANL CIEVEDTGVG IAPEALPKLF 780
  781 GAFEQADNSM TRKYGGTGLG LAITKKIAEV MGGTAGVNST PGGGSTFWFT VILGKSDEIA 840
  841 EVPSRTAMTE ADAMLRRDCA HRRILLAEDE PINREIAQML LEAVDLDVEM AENGEIAVRM 900
  901 ALANCYDLIL MDMQMPVLDG LAATRRIREL PACAAVPILA MTANAFAEDK AQCLAAGMND 960
  961 FIAKPVVPEV LYDTLLKWLR RL

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle