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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|71908875, gi|...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.64
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSAKPLNSAS TELALPGHWT AAIEPRLTSG ETTQAWLEID LDNRLKFSSG LVLVTNRRLL  60
   61 ALPAGETDWQ EWPLRGGLTL NHHDHAGVGA LELIDEQGQL ATWRYTLAKN LAALRVISEF 120
  121 DLNRDSIVSG QPVQRTTEDC CPKCKAPLPP GEDECPICNR EATVAPSTWT LFRLWRFARP 180
  181 YRWQLLTGFL LTLASTAAQL VPPYLTMPLM DNVLIPFQNG KPIDWPLVSM YLGGLFGAAM 240
  241 LAWVLGWIRT YILSLVSERM GRDLRTTTYE HLMGLSLEYF GGKRTGDLMA RIGNETDRIN 300
  301 IFLSLDLLNF ATDVLMITMT AVILFSINPW LALVTLLPLP IIGWMIHFVR EKLRTGFEKI 360
  361 DRVWAEVTNV LADTIPGIRV VKAFAQEKRE SERFRAANEH NLQMNDKLNK TWSLFTPTVT 420
  421 LLTEVGLLVV WVFGIWQISK GNSSVGVLTA FLAYIGRFYT RLDSMSRIVS ATQRAASSTK 480
  481 RIFDILDHVS SVPEPTSPVH LTGVTGQIEL KKAGFRYGTR AVTRDVDLII QPGEMIGLVG 540
  541 HSGSGKSTLV NLICRFYDVS EGQVLIDGVD VRSVPVAEFR SHIGLVLQEP FLFFGTIADN 600
  601 IAYGKPNATR QEIIAAARAA HAHEFILRLQ HGYDSLVGER GQGLSGGERQ RISIARALLI 660
  661 DPRILILDEA TSAVDTETEK EIQKALDNLV KGRTTIAIAH RLSTLRKADR LVVMDRGKIV 720
  721 EVGNHDELMA KEGHYFKLYM AQARNVDTEP MLPRTTSLPK THAE

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle