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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|71906060, gi|...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.75
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKRDFFSLAG FGEAASKLPI ERRIHLIRIE TFFGHAPGNA IRIALVSLIF TTALEKSGAG  60
   61 QNTIFAWIGV TLLTCLAMIG YEAWVRHVGL SIDNAESHLR RRRLLGLFAA VSVATGTVLV 120
  121 PVDADPLYHA LAVFLAYGMV SVTALAYAVL QRFYTEIALI ASGPVLVRYV WLWHEKGDSF 180
  181 FGFLAIVIVF TTALILFRGA ANTRWTTQAI EGYLQLHDEI VERCRIEAAL AAAEENASRL 240
  241 AAMLRLMCDN VPDMIWAKDL EGRYLFANQA MASCLLCASD TGEPVGKTDL FFAERERAAH 300
  301 PEDSQWFTFG EQCLATDLET LRRGVPSAFE EMGNVRGRYL CIDAFKAPFV DGSGQVIGTV 360
  361 GSARDITERK QVERELAKYR ENLEGVVRER TRELTVAKDL AETANRAKSA FLANMSHEIR 420
  421 TPLNAITGMA YLMRRDGVSE KQGERLDRID AAGQHLLEII HDVLSLSQIE AGRMTLEAKP 480
  481 LDLSVVCTGA LEVLADEARR KGLSLRQEFG ELPVGLHGDA VRLRQSLLNY LGNAVKFTEA 540
  541 GSVVLRCHEL SRNDSGHLIR FEVVDSGPGM SPESRTQLFQ PFHQVDSSST RVHGGTGLGL 600
  601 VITRRLAQLM GGDAGCDSTP GVGSRFWFTV CLADGEPAPN ASEGAVVNAA NELLRHRFAG 660
  661 RSVLLAEDSW VNREVVVEML EDQLLVVDVV ENGVAAVERV RERDYDLVLM DVQMPEMDGL 720
  721 EATRRIRAMP QRERLPIIAL TANAFAEDRQ ACLEAGMNDY LAKPFSPDKL FARVLHWLLE 780
  781 AERQAGH

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle