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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|47208124
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.52
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 APPPPPPPPP PPPPSLLPPP PSSPLLSRRR AHRAGLPAVD GEGQQTQRES GKACSSAAMT  60
   61 CSASDSEKIV INCGGIRHQT YRSTLKTLPG TRLSWLTEPD AYSNFDYDPK SDEFFFDRHP 120
  121 ATFAFILNYY RTGKLHCPSD VCGPLFEEEL AFWGIDETDV EACCWMNYRQ HRDAEEALES 180
  181 FETPEPDAPE DDPALTGGAD GDLKRLCMQE NGRRATWWEV WQPNMWALFE DPYSSKYAQG 240
  241 RTAEIRVLSS ARVADVVGPR SPRPTRGLFT MSLWQPGPFP GVPLPAPEHV LPCKREVVLT 300
  301 YVAFGSLFFI LLSISTFCLE THEVFNTIYN KTENTTTGNS TREEVVCVLF EVVTDEWLTY 360
  361 VEGVCVIWFT IEVLLRVIFC PDKAEFFRSP LNIIDFVAIV PFYLEVALSG LSSKTAKDVL 420
  421 SFLRVVRFVR ILRIFKLTRH FVGLRVLGHT LRASTNEFLL LIIFLALGVL IFATMIYYAE 480
  481 RLGADQKDPT AAAHTDFKNI PIGFWWAVVT MTTLGYGDMF PKTWSGMLVG ALCALAGVLT 540
  541 IAMPVPVIVN NFGMYYSLAM AKQKLPKKRN KHIPRAPQPG SPNYCKPDAL AMATASPHRL 600
  601 VGNVLAPGMV GSGSMMGTGD CPLAQEEIIE INRTDSKKNG DAAANTAALA NEDCPTIDQV 660
  661 LGDERSPATG GLGSTTSRER YPHDRACFLL SAGEFQRTTD GNVRK

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle