YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|47208069
Protein type:	Transmembrane
Type Confidence:	0.66
Topology Confidence:	0.60
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVRDCRPRGG MSKSSRALCE IALLLCSAAD IVLRSSSLLA LLAWLRFQLF GRLISAFRHL  60
   61 RRYNSRLLCS PLGTAVDLTN ARFFSPLQAA GKAGKDSGKT KTKAISRSQR AGLQFPVGRI 120
  121 HRHLKSRTTS HGRVGATAAV YSAAILEYLT AEVLELAGNA SKDLKVKRIT PRHLQLAIRG 180
  181 DEELDSLIKA TIAGGGVIPH IHKSLIGKKG QQKTV

Type	Start	End	Confidence
Cytoplasmic	1	20	0.60
Transmembrane Helix	21	44	0.61
Non-Cytoplasmic	45	215	0.89