YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|32034180
Protein type:	Globular with Signal Peptide
Type Confidence:	0.71
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNRRKFLKVG IGGGLASGLT PSVANAQAEN RPRIPTAVGM LYDSTLCVGC QACVAECQNL  60
   61 NKTAINPVGE QTWSNNDKLS PFTRNIIQVW SNGEGKYKDQ VDNGYAYIKK QCMHCVEPNC 120
  121 VTACPVQALT KDEKTGIVNY DPDICTGCRY CMVACPFNVP KYDYNNPFGE ISKCELCNQK 180
  181 GLERIDKGEN PGCCQVCPTG AIIFGSYNDL LAEAKRRLTL LRGTEYDYPR QTVDSKDTYK 240
  241 AKVPLYQQHI YGEIEGGGTQ VLVLSGVPHE NLDLPQLDEL ATGTRAAHLQ HTLYKGMILP 300
  301 LVALAGLTAM TYRSLHADKI EAKKQEWKLA REQMKVEEEK EDHHG

Type	Start	End	Confidence
Signal Peptide	1	26	0.99
N-region	1	17
H-region	18	23
C-region	24	26
Cleavage Site	26	27
Non-Cytoplasmic	27	345	0.95