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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|126097523, gi...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.78
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAKEQQLLID GMHCAACVRR VEKILMKVEG VTFASVNLAD QTAFVQGEAD PQAMVQAVEK  60
   61 IGFGAEILES EQERRAKQQA QTQRTLSHKK WQFIMALIVG FGLVVLGLVI GMIPNSTNLM 120
  121 YWFIAAAVSL FTMYFAGKDF FIGAWVSLKN KASTMDTLVA LSTGVAWLYS FWLTLFPQPQ 180
  181 AHVYYEASVM IIGFINLGKF LELKAKQRSS LALEKLLDLA PQQAVVFDRN NAAQTIPVKG 240
  241 IKPEMRVQAL TGDRLAVDGR LESGSIWVDE SMLTGEALPI EKKVGDKVRA GTLIQDGAGI 300
  301 YIAEQVGSQT ALARVINAVR HAQSSKPPLA QFVDKVASVF VPVVVSIALI SGLVWLFLGK 360
  361 DFSFALSIFT TVLIIACPCA LGLAIPLSTI AGVARAAEFG VLVRNIEALQ ASSEIDTLVF 420
  421 DKTGTLTTGE MTVSDIQTFN GFEPNRVLQL AKSLEVHASH PIAKAIVKFA ENQTACEVTN 480
  481 VQVVKGAGIV ANLGGDQIKV GNAKFVNFSG NLTASRATQI FVAVNDQLAG ILSVEDQLCD 540
  541 ESKAVIEKFK AQGYQCLMLT GDRQATAEYF AQQLGLDGVI AEVLPEQKAD KIRELQAQGK 600
  601 KVAMIGDGIN DAPALAQANV GIAMHNGSDI AVETADLSLM QHGLAPVLQI LPFAKRVLRN 660
  661 MKQSLLGAFM YNVIAIPLAA GVLYPFTGWL LNPMIAAIAM TMSSITVVLN SQRLLK

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle