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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|46143511
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.67
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEEQMDFYRE EDYGLYALTI LAQYHNIAVN PEELKHKFDL EGKGLDLTAW LLAAKSLELK  60
   61 AKQVKKAIDR LAFIALPALV WREDGKHFIL TKIDNEAKKY LIFDLETHNP RILEQTEFES 120
  121 LYQGKLILVA SRASIVGKLA KFDFTWFIPA VIKYRKIFIE TLIVSIFLQI FALITPLFFQ 180
  181 VVMDKVLVHR GFSTLNVITV ALAIVVLFEI VLNGLRTYIF AHSTSRIDVE LGARLFRHLL 240
  241 ALPISYFENR RVGDTVARVR ELDQIRNFLT GQALTSVLDL MFSFIFFAVM WYYSPKLTLV 300
  301 ILGSLPFYMG WSIFISPILR RRLDEKFARG ADNQSFLVES VTAINTIKAL AVTPQMTNTW 360
  361 DKQLASYVSA GFRVTTLATI GQQGVQFIQK VVMVITLWLG AHLVISGDLS IGQLIAFNML 420
  421 SGQVIAPVIR LAQLWQDFQQ VGISVTRLGD VLNSPTESYQ GKLALPEIKG DITFRNIRFR 480
  481 YKPDAPVILN DVNLSIQQGE VIGIVGRSGS GKSTLTKLIQ RFYIPENGQV LIDGHDLALA 540
  541 DPNWLRRQVG VVLQDNVLLN RSIRDNIALA DPGMPMEKIV HAAKLAGAHE FISELREGYN 600
  601 TIVGEQGAGL SGGQRQRIAI ARALVNNPKI LIFDEATSAL DYESEHIIMR NMHQICKGRT 660
  661 VIIIAHRLST VKNADRIIVM EKGQIVEQGK HKELLADPNG LYHYLHQLQS E

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle