YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|47207051
Protein type:	Globular with Signal Peptide
Type Confidence:	0.90
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MISHKLLFSG LRICAGLKGS GQASFSSRSP KFCVVGGGPA GFYTAQHVLR ARQDVEVDVY  60
   61 ERLPVPFGLV RFGVAPDHPE VKNVINTFTQ TAKHSRCNFY GNVNVGKDVS LGELRQAYHA 120
  121 VVLSYGAEDN RRMGVPGEDL AGVYSAKDFV GWYNGLPSCQ ELSPDLSGDT AVVLGQGNVA 180
  181 LDVARILLSP VDILKKTDIT QPALEALEKS QVRRVLIVGR RGPVQIACTI KELREMAKLP 240
  241 GTRPQMLASD FDGVAEALKD VPRPRKRLTE LLLKTALEVP DEDEQERRRR ASRVWAFRFF 300
  301 RSPVEVLAGP GTSRTAGIRL AVNRLEGSGE RAHAVLTGEV EDVPCGLIIS SIGYRSTLVD 360
  361 PSVPFDSRKA IVPNINGRVH QGLYCSGWLK TGPTGVIATT MNNSFDTAKS LTDDMASGAV 420
  421 DLSAAKAGSQ SIAGLLEKRG VKPVTFSDWE KIDSVETSRG EATGKPREKL LTVQEMLQVA 480
  481

Type	Start	End	Confidence
Signal Peptide	1	23	0.89
N-region	1	14
H-region	15	20
C-region	21	23
Cleavage Site	23	24
Non-Cytoplasmic	24	480	0.99