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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|168827087, gi...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.56
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MFRQGLAERL AQGGARFKAL SMASKIALMF IMLIALIAIF APWVSPYDPL QTLRPVQAPS  60
   61 SDYWFGTDRL GRDIFSRLVF GARTSLFIGL GAVGFAIIFG SILGATAATA SKFGNEVIMR 120
  121 LMDILMAFPG IALAAVLLAT FGNSVPIIIL TIAVVYTPQL ARVVRANVVS QWEEDYIRAE 180
  181 RVIGGSRSYI LLKHVVRNTA APVLVFATVM VADAIVLEAS LSFLGAGVQP PYPSWGNVLS 240
  241 EGRNLVLSGF WWATTFAGLM ILLTVLSLNI LSEGLTDALV NPKLKRNPNN KGDVSKPLAT 300
  301 DVQEAMAESL ALKRYLLKLN QKESERTDRM QLNSAMKPIL QVKNLSIRFP NRYGDIPLVD 360
  361 NISFTVHEGE TMGLVGESGC GKSISAFSIM GLLPKTAKIT GEILFTDRAG NQHDLLKTDK 420
  421 LNDLRGHEIS MIYQDALSAL NPSMRIKDQM AQLIQRGGKQ SAETLLRWVK LEPEKTLNRY 480
  481 PHELSGGQRQ RVLIAMALAR EPKLLIADEP TTALDVTVQA EVIKLLNELR EKLGFAMVFV 540
  541 SHDLALVAQI AHHITVMYAG QVVEVAPTSS LLMNPMHEYT RGLLGSVLST ECRAERLYQI 600
  601 PGSVPSPFDF AEGDRFASRS LRPNANPNQH LKLVQAEDNP KHLWASHLEN 

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle