YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|170717330, gi...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.56
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSTLSQKQVL TVIQGGLIAS CQPVDDGPMD KPEIVAAMAQ ASIIGGAAGL RIEGVDNLKA  60
   61 TRPAVNVPII AIVKRDLEDS PVRITPFLQD IEDLAAAGAD IIAVDGTDRK RPVDIKSAVK 120
  121 KIHELGCLAM ADCSNLKEGL YCQQLGFDII GSTMSGYTGG DIPEEPDYQL VKDLKAAGCY 180
  181 VMAEGRYNTP ELAKAAIEIG ADCVTVGSAL TRLEHIVSWF VTSVKSAKSY

Type	Start	End	Confidence
Signal Peptide	1	21	0.56
N-region	1	12
H-region	13	18
C-region	19	21
Cleavage Site	21	22
Non-Cytoplasmic	22	230	0.98