YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	Pdh-PC
Protein type:	Globular with Signal Peptide
Type Confidence:	0.61
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSFRGKNAVV TGGAGGIGLQ VSKQLLAAGA AKVAIIDLQD NLEEFVKLRA AHPTQSVMII  60
   61 KMDVANKKGV EATYEEIAKT FGNIDIVVNV AGIFNDKDVQ RTLLVNLGGI INSTLSALPY 120
  121 MGKDNGGKGG IVVNMSSVVG LDPMFIIPVY GATKAGIINF TRCLANEKYY QRSGIKFVTV 180
  181 CPGATMTDMF TNFTEKIIFP ETSDETYRIL DRLNKQSAAD VSRCILNVLE KDKNGAVYVI 240
  241 EGKRVYPLEI KPQWTGKEQA L

Type	Start	End	Confidence
Signal Peptide	1	27	0.60
N-region	1	18
H-region	19	24
C-region	25	27
Cleavage Site	27	28
Non-Cytoplasmic	28	261	0.94