YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|116051365, gi...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.58
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLGLGYLCAA NNSQAQGFTA PEVLIGSTQG FLEFKVEEYL QNSGLDGRYQ IQVNRVDPRL  60
   61 RLAECDRDLT LSQESPAQPI GRVTVRIGCE GSAPWTIFMP AQVKLFRQVV VAVQPLKRAH 120
  121 VLEDADIALV ERDVGLLTQG YLTDPARVVG QKLRRPVVND QVLAPVFLEQ AEAVRKGDQV 180
  181 VILARTATIN VKMPGEALSD GAPGQQIRVR NLRSQRVIKA RVIEPGTVEV NM

Type	Start	End	Confidence
Signal Peptide	1	15	0.58
N-region	1	6
H-region	7	12
C-region	13	15
Cleavage Site	15	16
Non-Cytoplasmic	16	232	0.99