YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|3328221
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MACAFSASTV STAAALVASP KPAGAPSACR FPALRRGRAG LRCARLEDAR ARSFVARAAA  60
   61 EYDLPLVGNK APDFAAEAVF DQEFINVKLS DYIGKKYVIL FFYPLDFTFV CPTEITAFSD 120
  121 RHEEFEKINT EILGVSVDSV FSHLAWVQTE RKSGGLGDLK YPLVSDVTKS ISKSFGVLIP 180
  181 DQGIALRGLF MIDKEGVIQH STINNLGIGR SVDETLRTLQ ALQYVQENPD EVCPAGWKPG 240
  241 EKSMKPDPKG SKEYFAAI

Type	Start	End	Confidence
Signal Peptide	1	27	0.94
N-region	1	18
H-region	19	24
C-region	25	27
Cleavage Site	27	28
Non-Cytoplasmic	28	258	0.99