YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|2982362
Protein type:	Globular with Signal Peptide
Type Confidence:	0.80
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MASSAAFTAA PSPVRPLHGL ADGGRRALRP ALASATFSIR APSGLSEFSS SLRRRFSLSS  60
   61 STIRVSESKP RRTSGVVYAT AATEKSIHDF TVKDIDGKDV SLSKFKGKVL LIVNVASRCG 120
  121 LTTSNYMELS HIYEKYKTQG FEILAFPCNQ FGSQEPGTNS EIKQFACTRF KAEFPIFDKV 180
  181 DVNGPKTAPV YQFLKSSAGG FLGDLIKWNF EKFLVDKNGK VVERYPPTTS PFQIEKDIRK 240
  241 LVAA

Type	Start	End	Confidence
Signal Peptide	1	21	0.75
N-region	1	12
H-region	13	18
C-region	19	21
Cleavage Site	21	22
Non-Cytoplasmic	22	244	0.99