YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|84316460
Protein type:	Transmembrane
Type Confidence:	0.60
Topology Confidence:	0.17
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNVVPYIDVM LVLLVIFMVT APMLNQGVKV DLPKVSSEAL PQDNNKQVLT LSVKADGSYY  60
   61 WNVGSEVDTE KQTDSAVSLE QMTDAVTKIM SARPDTQVFI RGDKAVNYGA VVGAMGALQQ 120
  121 AGVPNVGLIT EAP

Type	Start	End	Confidence
Cytoplasmic	1	5	0.17
Transmembrane Helix	6	27	0.52
Non-Cytoplasmic	28	133	0.56