YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|53727041, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.96
Topology Confidence:	0.58
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTSIDISNTR QLLERASNDD LEPLVEYILK ANTESLSKQV DFKRSHPEHR RYASSILDEL  60
   61 RLFGGNSFVN LWRKSGPSYT EVVRDVASKL KVKGAGSMEL IELEEAMVQS ILRQALEKSS 120
  121 GEDRRELEVI LREAGLDKTK MTALLNGSAL SGLVVPTVAR LILYRTSTVI VNSMAQQLLG 180
  181 HGLRSAVVAG GTFAGGRAVA ALAGPVGWVI AGIWTAVDLA GPAYRVTIPC VLQIAMLRLK 240
  241 ARAEAATDFM NGAFDG

Type	Start	End	Confidence
Cytoplasmic	1	141	0.84
Transmembrane Helix	142	164	0.58
Non-Cytoplasmic	165	192	0.51
Transmembrane Helix	193	217	0.69
Cytoplasmic	218	256	0.62