YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	UBIC_PSEAB
Protein type:	Transmembrane
Type Confidence:	0.62
Topology Confidence:	0.57
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPSNALWLRA DQLSSVSPTV LDWLFDEGSL TRRLTALADG AFRVEPLLEG WQTLRDDECQ  60
   61 GLDVPPGSSG WVREVYLHGH DRPWVFARSV AARSALEGSG FDLALLGTRS LGELLFSDSA 120
  121 FERGPIEVCR YPAAGLPAEV RAEGLWGRRS RFSRGALGVL VAEVFLPSLW DQAGIADV

Type	Start	End	Confidence
Cytoplasmic	1	151	0.61
Transmembrane Helix	152	170	0.57
Non-Cytoplasmic	171	178	0.83