YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|23470680, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTPQNPSARF FPTFLALVAL MLSLCVAPAW AAEKSAKRGI AYDIALPADL SALSAGVSWW  60
   61 YNWSPRPHDR LASYDYASMY GVDFIPMVWN GNVDDGQLKQ YLLAHSAIRY LLVINEPNLL 120
  121 DQANMTPEAA AGFWPRLEQI AAQTGVKLVG PAMNWGTMPG YGDPVVWLDA FYTAYRSMNQ 180
  181 NRDPRIDYLA FHWYDYGLPG MLDRLSKYGK PFWVTEFANW HAPDDGAQID SVDKQKRQMA 240
  241 EMVATLEQRQ DVFRYAWFTG RMNPDPHFSS LLDAEGKLTE MGQYYLSLPH SE

Type	Start	End	Confidence
Signal Peptide	1	31	0.99
N-region	1	22
H-region	23	28
C-region	29	31
Cleavage Site	31	32
Non-Cytoplasmic	32	292	0.99