YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|66046968, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.81
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAQGSPRTSR HRSVRYLLVA IGWLSVVLGV IGIFLPVLPT TPFLLLAAAC FARSSPRFYD  60
   61 WLVNHPQLGP WIRDYLEGNG IPLKGKVYAL GLMWLSISLS CYLVPSPWAR VFMLTSAVLV 120
  121 TLYILRQKTR APGDRTR

Type	Start	End	Confidence
Cytoplasmic	1	15	0.93
Transmembrane Helix	16	38	0.90
Non-Cytoplasmic	39	105	0.72
Transmembrane Helix	106	125	0.81
Cytoplasmic	126	137	0.91