YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|63257392, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.97
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNERAMVAKL SKVEKAAVLL LSLGETDAAQ VLRHMGPKEV QKVGVAMAQM RNVHREQVEE  60
   61 VMSEFVDIVG DQTSLGVGSD GYIRKMLTQA LGEDKANGLI DRILLGGNTS GLDSLKWMEP 120
  121 RAVADVIRFE HPQIQAIVVA YLDADQAGEV LGHFDHKVRL DIILRVSSLN TVQPAALKEL 180
  181 NQILEKQFSG NANTSRTTLG GIKRAADIMN FLDSSIEGSL MDSIREVDED LSVQIEDLMF 240
  241 VFNNLSDVDD RGIQALLREV SSDVLVLALK GSDEGIKEKI FKNMSKRASE LLRDDLEAKG 300
  301 PVRVSDVETA QKEILTIARR MAEAGEIVLG GKGGEEMI

Type	Start	End	Confidence
Signal Peptide	1	28	0.97
N-region	1	19
H-region	20	25
C-region	26	28
Cleavage Site	28	29
Non-Cytoplasmic	29	338	0.99