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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|63255537, gi|...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.14
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSLSSGLIAA VALTYMAIMF AIAFYGDRYS ASLRPTMRAW VYSLSLAVYC TSWTFFGAVG  60
   61 QAAEQLWSFL PIYLGPIVLM VLAPWVLQKM VLISKQENIT SIADFIAARY GKSQPLAVMV 120
  121 ALICLIGMLP YIALQLKGIV LGVNILIGAV ADSTGTRAQD TALVVSLILA LFTIVFGARN 180
  181 LDVTEHHRGM VLAIAFEALV KLFAFMAVGV FVTFGLYDGF DDLFNQAKLA PRLEEYWKDT 240
  241 INWPSMFVQT GVAMMAIVCL PRQFHVTVVE NIEPQDLNLA KWVFPAYLAL AALFVVPIAL 300
  301 AGQMLLPGSM LPDSFVISLP LAHAHPSLAL LAFIGGASAA TGMVIVACVA LSTMISNDML 360
  361 LPWLLRRKNT ERPFEAFRHW MLSVRRISIV MILLLAYVSY RMLGSTASLA TIGQIAFAAI 420
  421 TQLAPAMFGA LYWKQANRRG VFAGLAAGIF IWFYTLVLPV AAHGMGWSLS TFPLLSWLHS 480
  481 NPFDLPISPM TQGVVLSMAG NCTLFAWVSM LSRTRVAEHW QAGRFIGQET QGRDFSRPLL 540
  541 AVQIEDLLSL SARFVGEDRA RQSFIRFAQR QGKGFNPSLN ADGEWIAHTE RLLAGVLGTS 600
  601 STRAVVKAAI EGRDMQLEDV VRIADEASEV LQFNRALLQG AIENITQGIS VVDQSLRLVA 660
  661 WNRRYLELFN YPEGLIGVGR PIADIIRYNA ERGLCGPGEA EVHVARRLHW MRQGRAHTSE 720
  721 RLFPNGQVIE LIGNPMPGGG FVMSFTDITE FRAAEHALKG VNESLEQRVA ARTHELSQLN 780
  781 QALTEAKGTA EAANESKTRF LAAVSHDLMQ PLNAARLFSA ALSHQQEGIS SDAQQLVRHL 840
  841 DSSLRSAEDL ISDLLDISRI ENGKITPDRQ PFPLSALFDT LGAEFKALAQ EQGLSFRVRG 900
  901 SSLRVDSDIK LLRRVLQNFL TNAFRYAKGP ILLGVRRYGE SLSLEVWDRG PGIPEDKRKV 960
  961 IFEEFKRLDS HKTHAAKGLG LGLAIADGLC RILEHPLQVR SWTGKGSVFS VRVPLAAPQA1020
 1021 ALPATLPDVS RPALNGTQVL CVDNEDSILI GMHSLLSRWG CQVWTARNRQ ECEALLNNGV1080
 1081 RPQIALVDYH LDEGETGTEL MVWLRTRLGQ PVPGVLISAD GRAELIAQVH AAGLDYLPKP1140
 1141 VKPAVLRALL SRHVSLDG

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle