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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|66046307, gi|...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.29
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNDSEMGTQM PDNAPRLDTG LASLVMLARF HQVAASPEQL AHEFGSPDQY LSQDSLLLAA  60
   61 RKLGLKAKAA RTTTERLDRT PLPAIAADNN GGFFIIARLD QGKALIHDPF SQRPEVVTFE 120
  121 ALQERWTGQL LLIRSEAGTP GESSSFDFTW FIPAIVKYRK LLGEVMLVSF VLQIFSLITP 180
  181 LFFQVVMDKV LVHHGLTTLD VIAIGLAGVM LFESALSGLR TYVFAHTASR IDVELGSKLF 240
  241 RHLITLPLSY FQARRVGDSV ARVRELENIR NFLTGNAITL LLDVLFSVVF IAVMFYYSGW 300
  301 LTLIVLLSLP LYILVSVLIT PVLRKRLNDS FARGAENQAF LVETVNGIDT LKSMAVEPQA 360
  361 IRKWDNQLAG YVAAGFKTQN LSTIANESVS LIGKLVTVAT LWFGARLVID GQLSVGQLIA 420
  421 FNMLAGRVAQ PIMRLAQLWT NFQQTGVSVQ RLGDILNTRN ELSQVNRSAL PPIKGRIEFD 480
  481 QVHFRYRPDG SEILRGINLV ITPGQVIGVV GRSGSGKSTL TRLLQRLYVP ERGRVLVDGM 540
  541 DLALADVSSL RRQIGVVLQD NMLFNRSIRE NIALSDAGAP LEAVMQMAKL AGAHDFILEL 600
  601 PEGYDTMVGE HGASLSGGQR QRIAIARALM GNPRILIFDE ATSALDYESE RIVQQNMQAI 660
  661 CKGRTVIIIA HRLSAVRDAN RIVVVDRGQI VEQGTHAELL THQAGHYSRL HRLQQGGSHV 720
  721 

YRC Informatics Platform - Version 3.0
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