YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|6630948
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLGFLGKSVA LLAALQATFT XASPVTANDV SVEKRASGYA NAVYFTNWGI YGRNFQPQNL  60
   61 VASDITHVIY SFMNFQADGT VVSGDAYADY QKHYDDDSWN DVGNNAYGCV KQLFKLKKAN 120
  121 RNLKVMLSIG GWTWSTNFPS AASTDANRKN FAKTAITFMK DWGFDGIDVD WEYPADDTQA 180
  181 TNMVLLLKEI RSQLDAYAAQ YAPGYHFLLS IAAPAGPEHY SFLHMSDLGQ VLDYVNLMAY 240
  241 DYAGSWSSYS GHDANLFANP SNSNSSPYNT DQAIKDYIKG GVPASKIVLG MPIYGRSFES 300
  301 TGGIGQTYSG IGSGSWENGI WDYKVLPKAG ATVQYDSTAQ AYYSYDPSSK ELISFDTPAM 360
  361 INTKVSYLKN LGLGGSMFWE ASADKTGSDS LIGTSHRALG SLDSTQNLLG YPNSQYDNIR 420
  421 NGLN

Type	Start	End	Confidence
Signal Peptide	1	27	0.94
N-region	1	18
H-region	19	24
C-region	25	27
Cleavage Site	27	28
Non-Cytoplasmic	28	424	0.99