YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|13641346
Protein type:	Transmembrane
Type Confidence:	0.97
Topology Confidence:	0.70
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAINRSSDHE SDENTRLYHP YQNYQVPIKS QYLYKLPTSP EFLFTEESLK QRRSWGENLT  60
   61 FYTGTGYLAG SVAGASAGIF SGIKSFENGD TTKLKINRIL NSSGQAGRTW GNRVGIVGLI 120
  121 YAGIESGVVA VTDKDDVWTS VVAGLGTGAV FRAARGVRSA AVAGAFGGSA AGAVVAGKQV 180
  181 FKRYAHI

Type	Start	End	Confidence
Cytoplasmic	1	58	0.85
Transmembrane Helix	59	80	0.77
Non-Cytoplasmic	81	159	0.61
Transmembrane Helix	160	181	0.76
Cytoplasmic	182	187	0.70