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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|13641333
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.74
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAASISLEEI KNETVDLERI PVEEVFTQLK CTKEGLTTAE GEQRLQIFGP TSSRRRKRAS  60
   61 SSSFWASCGI LSRGSWRLRL SWPLCWPMEG VSLQIGRILL VSWFSSSSIK KTASTRKTRM 120
  121 RMRPMPARHQ TNPKPRCSEM VGGQQEAAIL VPGDIISIKL GDIVPADARL LEGDPLKIDQ 180
  181 SALTGESLPV TKNPGDEVFS GSTCKQGEIE AIVIATGVHT FFGKAAHLVD STNNVGHFQI 240
  241 VLTAIGNFCI CSIALGMLVE VVVMYPIQHR KYREGIDNLL VLLIGGIPIA MPTVLSVTMA 300
  301 IGSHRLSEQG AITKRMTAIE EMAGMDVLCS DKTGTLTLNK LTVDKNLIEV FAKDTDKDGV 360
  361 LLYAARASRV ENQDAIDACI VGMLADPKEA RAGIQEVHFL PFNPVEKRTA NTYIDSNGKW 420
  421 HRASKGAPEQ IIDLCNLKED VKRKVHEIID KFADRGLRSL GVARQQVPEA SKESTGGPWE 480
  481 FMGLLPLFDP PRHDSAETIR RALHLGVNVK MITGDQLAIG KETGRRLGMG TNMYPSSTLL 540
  541 GDKIHEATGL PIDELIEKAD GFAGVFPEHK YEIVKRLQDR KHICGMTGDG VNDAPALKKA 600
  601 DIGIAVADAT DAARSASDIV LTEPGLSVIV SAVLTSRAIF QRMKNYTIYA VSITIRIVLG 660
  661 FMLIALIWRF DFSPFMVLII AILNDGTIMT ISKDRVKPSP MPDSWKLKEI FATGVILGAY 720
  721 LALMTVIFFW IAHDTDHFTK AFGVRPIGDD INQLTSALYL QVSIVSQALI FVTRSRSWSF 780
  781 VERPGLLLVT AFLAAQLVAT LIAVYASWGF ARIDGIGWGW AGVIWIFSIV TYFPLDILKF 840
  841 IIRYALSGRA WDNLIQNKTA FTSKKDYGKG EREAQWATAQ RTLHGLQTAD TSNLFNDKNN 900
  901 YRELSEIAEQ AKRRAEVARL RELHTLKGHV ESVVKLKGLD IDTIQQHYTV 

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle