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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|23466576, gi|...
Protein type: Transmembrane
Type Confidence: 0.88
Topology Confidence: 0.79
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNLKKLLSQP LQTPIRDKKA ERNLFARRAL IAFLGVLGLS ALLFTNLYYL QIVNYETYQT  60
   61 RSNGNRIKLL PLPPTRGLIY DRYGKLLAEN ITFLGLYIVP EKVEDLNRTF EELRYIVGLN 120
  121 DDDIENFKKE RRRSSRYMPI LLKGDLSEEQ IARFAVNQYH YPSLDIRPYF KRHYLYGEPL 180
  181 THILGYVAKI NEKDVERLKK NEKYANYAGT HDIGKLGIER YYEDDLHGKV GFEEVEVNNR 240
  241 GKVIRKLREQ PAIAGKSIHL TIDLELQRYI ANLLGNLRAA VVVLDPKDSG ILAMVSTPSY 300
  301 DNNLFVGGIS SADYKQLLTD PNRPLYSRVT QGAYPPASTI KPFVAIAGLQ ENLITTNTTI 360
  361 FDPGYWILPN TTKRFRDWKK SGHGYTDLNK AIVESSDTYF YQLAYDMGIS RLSQWMKRFG 420
  421 FGIPTGIDIQ EETAALMPSR EWKQKRYKRP WVQGDTISVG IGQGYWTATP LQVAKATAVL 480
  481 VNNGKVNTPH LMKAVEGSEM QPYQDPRLYE DITEPQAVFW ETIKQSMYNV IHAPNGTGRK 540
  541 SFIDVSYPVA GKSGTAQVFS LKENQTYNAN ELDNKLHDHA WFIGYAPYDN PKMVVVVILE 600
  601 NAGGGSSKAG PVVRKIMDYY LNIRLPQVQL QNEKGKS

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle