YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|23467301, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.91
Topology Confidence:	0.52
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAYRYDPDLE FLAECSDEDL EDLVYCLTHD KDGTVRFTEE LLSSDKYKRY APQHSKYWEE  60
   61 IAAEIQCFGA NTFATLLRGG EGILYKEVLT DVCDKMKVNY NSNSSVERIE QNLLSKILED 120
  121 ALEKMDPNEI KELATALGLK NTGNITKQVL LGSFQAIFIK GGFKSYQLTL IVVNAVIKAL 180
  181 IGRGLSFAGN AALTRTMSIL AGPIGWVITG LWTAIDIAGP AFRVTIPAVI QIAALRQKVL 240
  241 YANIADQIEF SN

Type	Start	End	Confidence
Cytoplasmic	1	165	0.78
Transmembrane Helix	166	187	0.52
Non-Cytoplasmic	188	192	0.50
Transmembrane Helix	193	226	0.59
Cytoplasmic	227	252	0.59