YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|188219291, gi...
Protein type: Globular with Signal Peptide
Type Confidence: 0.84
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MMATRQLLGA ARSRAVGSAS LGLRRTMATV SDSALDKKVK QNNWEEGNFI NYKKMSENLA  60
   61 IVRSRLNRPL AYAEKILYSH LDDPHGQEIE RGVSYLRLRP DRVACQDATA QMAILQFMSA 120
  121 GMPSVANPTT VHCDHLIEAQ QGGEKDLARA VGINKEVYDF LASACAKYNI GFWKPGSGII 180
  181 HQILLENYAF PGGLLIGTDS HTPNAGGLGM AAIGVGGADA VDVMANLPWE LKAPKVIGVK 240
  241 LTGSLSGWTS PKDIILKVAG ILTVKGGTGA IVEYFGPGVD SLSATGMGTI CNMGAEIGAT 300
  301 TSLFPFNDRM YDYLKATKRT EIGDFARSYA KELRQDDGAE YDQLIEINLS ELEPHINGPF 360
  361 TPDLATPISK FAEAAKANNW PDEVKVGLIG SCTNSSYEDM SRAASIARDA LNHGIKSKAL 420
  421 FTVTPGSEQI RATIARDGQL QTFEEFGGVV LANACGPCIG QWDRQDVKKG EANSIISSYN 480
  481 RNFTGRNDGN PATHSFVTSP DLVVAMSIAG SLSFNPLTDT LKDKDGKDFK LSPPTGNGLP 540
  541 ERGYDPGQDT YQAPPKDRAN VTVQVSPTSD RLQLLSPFNA WDGKDATDMP ILIKAQGKTT 600
  601 TDHISMAGPW LKYRGHLDNI SNNMLIGAIN AANGEANKIK NFTTGEWDAV PAVARDYKAK 660
  661 GIRWVVIGDW NYGEGSSREH AALEPRHLGG LAIITRSFAR IHETNLKKQG MLPLTFSDPA 720
  721 DYDRINPDDK VDILCTELAV GKPITLRVKP ANGEAFEIPL SHTFNEAQIE WFKNGSALNT 780
  781 MAKKTKN

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle