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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: ATG9_PODAS
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.67
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPRKLFSKMP TTQGRSFYEE LRGHDSEGYD GGSRAGLLDE ENLNHNFQDY DLDHAEGLTV  60
   61 DDSRATLAGL RKTPASKVPP GHQNDRSMWL AHDDDADNDV PPSLLVEPRG AHLAGKPKRK 120
  121 QSRQAAYTMP GSSNTRAQWE TIQAHQPLHN DEPFTQSHRG NGAPGSLFSG SASLDAKKMA 180
  181 EWRWANVQNL DKFIKEVYDY YRGCGIKAII TERVLHLGNV AFIAVLLTFL TQCVDYSLVR 240
  241 GSQKLSQIIV PQCTRKMSGW WNLGLWLFAF YFIWKAIQYI LDLHRLFHVR DFYTHLLNIP 300
  301 DHDMQTITWQ EVVARVMALR NQNSKTATTL TPLQRHFIGS QSKERLDASD IANRIMRREN 360
  361 YLIALFNKDI LDLTIPLPFL RNRQYFSRTL EWTLMFSVLD MVFDEKGQVN QKFLRADRRG 420
  421 EISEKLRSRF QFAGIMILVL SPFVSLYLVI YYFLMYYHEI QKNPSVLSSR SYTPLAEWKF 480
  481 REFNELPHLF QKRLDMSKAF ATHYMDQFPK VKTEMVAKSV AFVSGALATV LAIASVFDPE 540
  541 LFLGFEITPD RTVLFYTAIF GSIWAVAHGM QSQDDVVFDP EYAMRNVIEY THYEPDHWKD 600
  601 RLHSYDIKLE FAELYKPKIV IFLEEILGIL TTPFVLFFSL PKCSDQIIDF FREFTLHIDG 660
  661 LGYVCTFAEF DFKKAMANAK KPSDGGDVRD EYYSAKHGKM EASYYGFIGN YGNFALNPKG 720
  721 APGSHLPPGM RNQFHPPPAW PGLNSPPLGA DMQTSRMGRS EFRSRSRAPG QGLRPGPSMV 780
  781 APSPMASILL DPHHLPPSHL VNPGRASHPH RVQQNRRPGE SNIIEESLED EERGREGVNR 840
  841 HDDEEVYGHG DGMDESAWQT SPARTLSRDN SAIEGTGTAE AGVVDMIYQF NQAQFTRNGV 900
  901 

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle