YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|46191080, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.65
Topology Confidence:	0.55
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSKSSRTGKP GKTGKAQVRK KGSAGPIAFF VSLFIIALGT IQLVSTFHTY ALNLAELNGL  60
   61 KREEASLIAQ KQELENDIKR WDDKAYITAQ ARERLGFVFP GEQAVRVLHP EAVTGSDSES 120
  121 QKTEDSSNSN KKVLPWYSEL SYSLKKADEP VTDSESGKSD ISGSSDSSSN DSSKRSDKSD 180
  181 QNTQSDQNTQ QNTQQNTGEG TQQ

Type	Start	End	Confidence
Cytoplasmic	1	20	0.62
Transmembrane Helix	21	44	0.55
Non-Cytoplasmic	45	203	0.97