YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|53689330
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.94
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVINTIISFI AVFRQKREIA TIWAWMLVLL LLPVVGFAIF FLAGSRISSK KIFRLRTQEQ  60
   61 RGLDQIALNQ KKQLQDIENL LPIPYSATEL LKLFLSSDRA VLTRGNKITI FSDGQKKFDK 120
  121 LFSDIRAAKE HIHLEYFSIF DDKIGHQLVD LLTEKAGEGV EVRVIYDQFG SHGQHPKMYR 180
  181 QLRAAGGVAV PFLMRRFQLL TLRFNFRNHR KIAIIDGKIG YIGGFNVGDQ YIGESKKFGY 240
  241 WRDTHTRIIG DAVLSLQSRF LMDWNATAEG RELLTQTTKY FPENFSLPGK SMVQIVSSGP 300
  301 DDDMKQIKQG YMRMFSSARE SISIQTPYFI PDGPVLETLE VAILSGVKVK LMIPNQPDHP 360
  361 LVYRATEYYA QELIDLGATV YRYDGGFLHS KVVIIDNEVA TVGSANMDIR SFSLNFEGNA 420
  421 FIYDPDFAAD LEDLFEQDVL KSTKLTMEYF EKQSAWMKFK QKFSRLFSPI L

Type	Start	End	Confidence
Cytoplasmic	1	20	0.95
Transmembrane Helix	21	44	0.94
Non-Cytoplasmic	45	471	0.98