YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|95007437\|emb\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.83
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MQRPRSGRVC VYLVTNVLLA LSIWLSRASA FRLSRWSASA LCPAQSPSCV GTAHRLSTPL  60
   61 IAAGCELGSF PSGCTNEFFW RRHGSQTALG ISSRRHLQVI RRKKYRTKGT STVRRHYGIK 120
  121 GRGGGKLRLG KHTGVPLQAM ECPARRCMLL GKMDNTKARN RSHSRVATHK VQRLNLHWKR 180
  181 LWWPEAGYYV RLRLSVKGIR TIKKYGLQRA ADKFGLNLKK KKYYAGYSHR RMVSRLSLAG 240
  241 GTAGHINADE IAGPLSGQRE TSTIARVDAA KM

Type	Start	End	Confidence
Signal Peptide	1	30	0.82
N-region	1	21
H-region	22	27
C-region	28	30
Cleavage Site	30	31
Non-Cytoplasmic	31	272	0.99