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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|186463141, gi...
Protein type: Transmembrane
Type Confidence: 0.70
Topology Confidence: 0.61
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVERHPQADI RAANERALRS LGRAIALSSG QFSLVLVCCN YRVLQELMLQ RLEELSSGVH  60
   61 HIQKVILPHN ARSLYTSIHL QLVTEENPPS ALMILGLESV DGIDDLLRSI NHIRDEFRKR 120
  121 HPFPMILWVN EEVLQKVVRL APDFASWAAT PIRFEMTTQS LRQFLQQETD SLFATVLPSD 180
  181 AGQHQPPQVA KHYFTVEQVW KNSYELHFAI GELHDRGITL EPELHASLEF VFGLDNYISD 240
  241 RINTALSHFQ QSLQVWQKLE EIGGAGERGS GGAGEQGDER VFSSSTPPNR PSPLLLRQGV 300
  301 LLFYIGLCYC RLAEQNQIEN RRHWYTAKFY FQQCLNVLQV AGRLDIVAGF ISQLAEVLQY 360
  361 LQEWEELQTV AQKSLELHQT YGSQIQLACD YGFLAQVAVQ QSRWIQASIL AHVSLLKLGE 420
  421 AQKHNDPYNC LFPLLLAQIY YLVLAKAQRN LGELVIAHEY LEKATKELPA ALESSAHQYD 480
  481 AHRYIRLLRT LRSLYFEEGR YLEAYYIRQK RRSVEQQYGF RAFIGAGRLQ PQRQATNPAL 540
  541 MAPSGSSSVA LEIAASGRER DINNLIGRIS RADQKLTVIH GQSGVGKSST VTAGLVPALQ 600
  601 NRAIGDQIAV PVVLQVYTDW ARELEKSLSQ AMSSDASLAV YAEIKLEANI EAAEVLPYSP 660
  661 TPITIVRILQ QLQQNADNHL ITVLIFDQFE EFFFGYSDRK QKQEFDKFIS DCLNIPFVKV 720
  721 ILSLREDYLH RLLDFKHLSA LEAINNNILD KHIRYQLNNF SPEYAKAIIQ KLTERSQFNL 780
  781 EPALIDALIE DLSTEFGEVR PIELQVVGAQ IQDERITTLE EYQPYRPNKL IERYLKELIK 840
  841 DCGPENERAA LLVLYLLTDE SNNRPFKTRA ELAAQLAELE DASKLELVLD ILVSSGLVVL 900
  901 FPDVPERYQL IHDYLVDLIR YLQQQESSLQ VQLNQLRHKV EQSKAEIERL KSELSQKKQR 960
  961 STLADSHPQQ GLDLLTELRE LHKREELSQL QIEQLRAELK EKELTAKLAE SQKKQRLSEA1020
 1021 QLNRSLKIAL TASVLAILGL SVSIVTAVDS EIKTLSASSE ALFASQKGID SLKEGLRAGR1080
 1081 KLQQIVWVDS YTREQVQTAL YQAVSGLREY NRLEGHLSGV NNATFSPDRS LIASASADTT1140
 1141 IKLWLPDGSL FKTLSGHEDV VNSVSFSPDG QIIASASQDK TVKLWSREGV LLVTLLGHQG1200
 1201 VVNSVSFSPD GQIIASASTD KTVKLWSRDG KLLKTLPGHD GAVLSVAWST DGQTIASGSA1260
 1261 DKTVKLWSRD GKLLKTLQGH EDAVKSVAWS TDGQTIASAS LDQTIKLWNL EGKLLRTLSG1320
 1321 HSAGVTSVSF SRDGNTIASA STDETIKLWS FEGVLLGTLK GHNNWVNSVS FSPDGRTLAS1380
 1381 ASRDKTIKLW HWDDVLLRKP KADNDDWITS ISFSPDDRTL AAGSRDKTIK LFSREGKLLR1440
 1441 ILTGHQGQVW GVSFSPDGQA IASASKDQTV KLWGADGKLL NTLQGHNSTV LSVAWSPNSQ1500
 1501 IIASASKDQT VKLWSRDGKL LNTLQGHKDA VNWVSFSPDG KLLASASDDK TVKIWSLDGK1560
 1561 LLYTLIGHSR RVNGVSWSPD SQVIASVSID STVQLWSRDG GLLNTLTGDG DSFISVSFSP1620
 1621 DGKTLAASSD DKIRIWNREG TLLIALKGYE AELTSVSFSP DGKTLAAGSG NGTVIFQNLA1680
 1681 DIQLEKLLAR GCYLLYDYLQ TNQKVMKGDR ALCSSR

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