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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|23129877, gi|...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.60
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MQLDLSPLWI SLKTSLLATF ITFFLGIAAA YWMLGYRGKG KSLIEGIFIA PLILPPTVVG  60
   61 FLLLLLFGKN GPVGKLMQPF DFTIVFTWYG AAIAATVVSF PLMYKTALGA FEQIDGNLLR 120
  121 VARTLGATET TIFWRISLPL ALPGIVAATM LAFARALGEF GATLMLAGNI PGQTQTIPMA 180
  181 IYFAVEAGAM NEAWFWAIAI MVISLSGIIG VNFWQELREK KRGAGSRLAV SVAEREQGAG 240
  241 EAGGENLYTP HSRFEFGGLF VNIEKILTSF DLKVAFTSDE QPLGLLGSSG AGKSMILRCL 300
  301 AGIETPSSGR IVLNDRVLFD SEQGINLPSR DRRIGFLVQN YALFPHLSVA QNIAFGLPKK 360
  361 LSAGSIRVQV EEQLIAMQLQ GLGDRYPHQL SGGQQQRVAL ARALASQPEA LLLDEPFSAL 420
  421 DTHLRSQLEQ QMTETLADYQ GVTLFVTHNM EEAYRICPNL LVLEHGRAVH HGSKYDIFQH 480
  481 PATVSVAQLT GCKNFSRAVL QSSQKVEAID WGCTLQVIEP VMSELSHIGI RAHQFIFTND 540
  541 SSQENTFPCW IVRTSETPHR MTLFLKLHSA GKNSQDYHLQ AEVFKEKWVT MKDQPFPWYV 600
  601 RLDPLRLILM E

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle