YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|186683261, gi...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.87
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSLFQDLTTY QNIFGKAMTS EDFRETRTNS ALPIVLGVLM ILLGIAAIAE PFIATIAITI  60
   61 VFSWTLIIAG IVRIVHAFQS RHKRGFWTTL VVGILYVIGG ILLISNIFGA ALSLTLAFGF 120
  121 IIFIEGVLEV IAAFEMRRDP NWGWVLFSGI MAIILGIFIL YQWPVSAVWV LGVFVGINFL 180
  181 LTGVWMIMLS LASRSLPDHR ARV

Type	Start	End	Confidence
Cytoplasmic	1	27	0.98
Transmembrane Helix	28	49	0.90
Non-Cytoplasmic	50	54	0.76
Transmembrane Helix	55	76	0.93
Cytoplasmic	77	84	0.92
Transmembrane Helix	85	104	0.95
Non-Cytoplasmic	105	111	0.63
Transmembrane Helix	112	133	0.91
Cytoplasmic	134	141	0.87
Transmembrane Helix	142	161	0.96
Non-Cytoplasmic	162	167	0.76
Transmembrane Helix	168	192	0.87
Cytoplasmic	193	203	0.96