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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|186464141, gi...
Protein type: Transmembrane
Type Confidence: 0.86
Topology Confidence: 0.78
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPPLISIVIV NYNRESYLGV AIASVLAQTW QDFELLIWDD GSTDGSVAIA NAYAQQDGRV  60
   61 RVVEAQHQGV SAACKAAIAQ TSGIYIGIVD SDDILAPTAL AQTATVLNRH PETGFVYTDY 120
  121 LNIDEKGIVI GYGHRCNIAY SQDNLLVNFM TFHFRLMRRS VYDRVGGFNE SFSGCAYDYD 180
  181 LCLRLSEVTQ VRRVQEPLYL YRLHSQSMSV TRRTEQILWS QKAIAQALWR RGLAEKLQID 240
  241 VELPAGRFIL RRKKPLLHKI AASVLAILPL VTVTSMGLSQ AQQIVPAADG TNTIVTPNGN 300
  301 RLDITGGITS GDGANLFHSF QQFGISPEQI ANFQASPALQ NILGRITGGN ASVINGLIQV 360
  361 TGGNANLFLM NPAGFIFGSN ATLNVPGAFT VTTANGIGFG SSWFNAIGVN DYAALVGNPN 420
  421 GFAFSMNQPG AIANAGNLAV GVGQNLNLLG GTVVNTGQLS APGGQISITS VPGQNWVRLS 480
  481 QPGNLLSLEI QPLASSSTQP NNWTIPIASI PELLTVGNTG LTANPDGTVK LTGSNVTIPT 540
  541 TPGTTIVSGK VDVSSQTGGT VTALGKKVAL VDANINASGT NGGGTVLIGG DYQGKGTVPN 600
  601 ADRTYVDSKS VINADSHLNG NGGQVIVWGN DTTQYFGKIS ARGGANAGNG GFVEVSGKNF 660
  661 LTFNGLVDAS APNGSFGTLL LDPSTLTIID AAAGTGDFDA TAGNIAFNDP DIGANTVSWG 720
  721 AIAASGVNIN LQAIGNITIN DITGATPGVT TAGVATLNLG GGSFSLTSQN GSVNFVDPTN 780
  781 TIQTTGGAIN ISGASLLLGN LNTTRNFARS GDITLSATTG NISTGNIIAS GQGYSAGNVQ 840
  841 VVSSNGGITL NQINTSDTGN NGVNTAGTVT LTAAGNILTD RINSFSSDAG SLGRGGDIVA 900
  901 TTTAGSITTG AINSSVFKTG GGDFTGTAGA VTLTATENIT VNDAINASAI AIGVDGTGNV 960
  961 TGGNVTLQTT NTAGSNISFT NINTQSVADD FVDGNTVQGG NVQVLTNGLV QGIGVGTTIA1020
 1021 TGGIFDSGAG VTTSIAGGTV TIRHDGGPGN VPFIVGDATS ANGTAGTIDV GGGTTIASGN1080
 1081 FPVLPTGGDA IGTPTGITIT SVNTPPVLTA NSSLPNTQTN QPVTLTFSSL AALVSDANND1140
 1141 ITSIQVDVVN TGNLTVNGLP VIPGVTTLSS DDTLVYTPPT DVNGSLNAFV ISANDRVSSS1200
 1201 APVQVGINVS QIPPTIPTPT PTTIPTTIPT PTFTPNPPPC SFQCTPGKPN VPDPNNPKID1260
 1261 NPVINTDPTP EDKFTDDFAD HLGIPTPRIK TLDDAKEIAR KIEEATGVKP AFIYISFVPV1320
 1321 EIIPERNLGK AQKFTKQLNT LAEQDSDQLE IVVVTGKGNP IRKRIPETTK AKVIQVAQEF1380
 1381 RDQIVSPQNR RRTGYLRPSQ QLYRWIIAPL EADLQAREIN NLVFLPDMGL RSTPMAALHD1440
 1441 GKGFLVEKYS IGLMPSISLT NTLYKDIKKS QVLAMGVSQS TQGQEPLPAV PLELSTLVSK1500
 1501 LWQGKLLLDK QATLENLKTI RRQQPFGIIH MATHADFTTG ALSNSYIQLW EDKLRLNQLR1560
 1561 QLRFNEPEVE MLVLSACRTA LGDEESELGF AGLAVLAGVK TSVASLWSVN DAGTAALMTK1620
 1621 FYQNLRTAPI KAEALRQAQV AMAKGQIYVK NGQLEGLGVV GNLSLPTNSA DEGEQLLTHP1680
 1681 YYWSGFTMVG NPW

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