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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|23128312, gi|...
Protein type: Transmembrane
Type Confidence: 0.87
Topology Confidence: 0.81
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSKQGEIQQS VTESEYAATS ATGNATITVT NYYYREEARL VASDSTDAAD ESLPCPYRGL  60
   61 FHFGPNDADI FFGREIFIEE LYSATKTRNF IPVLGASGSG KSSVVLAGLV PKLQTAGNWQ 120
  121 FTHFRPGADP FHALAVALVP LYTPNLDATD QIAQARKLAG YLQDGSMLIS DVFAKIRQNH 180
  181 PNQRVLLIAD QFEEIYTLCH HQETRHKFLD CLLASLETSS SLSASATVWV TTMRADFLGN 240
  241 ALSYRPFADI LQNADVKLGP MNREELTQVI EKPAEKLGVT FASGLVERIL EDVENQPGNL 300
  301 PLLEFALTEL WNKRTGKQLT HKIYEEIGQV EGALARHADE KYGNLTEEEK EKVRRIFIQL 360
  361 VRPGEGTEDT RRVAMKAELG EQSWDLVKQL ADARLVVTSR NATSQETVEV VHEALIRNWG 420
  421 ELREWMNKDR VFRAWQERLR SAKGQWEATQ RDEGALLRGA ALVEGEEKLK QRREDISAGE 480
  481 QEFIQASVAL RDREQKQRER TKRLTFSGLA GGLVLALGLS GLAGIGWGNA EISQINAFAQ 540
  541 SSDGFLSLDG RKAVESSVKA AVKMRGKFWV DANTRTQVKL TLLNTVHNVA APNTLGGHAK 600
  601 EVQGISFSPD GKMLASASDD NTVKLWDTTT GKEIKTLTGH TNSVLGISFS PDGKMLASAS 660
  661 SDNTVKLWDT TTGKEIKTLT GHTNSVLGIS FSPDGKMLAS ASADNTVKLW DTTTGKEIKT 720
  721 LTGHRNSVFG ISFSPDGKML ASASADNTVK LWDTTTGKEI KTLTGHRNSV FGISFSPDGK 780
  781 MLASASFDNT VKLWDTTTGK EIKTLTGHRN SVNDISFSPD GKMLASASDD NTVKLWDTTT 840
  841 GKEIKTLTGH RNSVNDISFS PNGKMLASAS FDNTVKLWDT TTGKEIKTLT GHTNSVNDIS 900
  901 FSPDGKMLAS ASGDNTVKLW DTTTGKEIKT LTGHRNSVND ISFSPDGKML ASASGDNTVK 960
  961 LWDTTTGKEI KTLTGHTNSV NGISFSPDGK MLASASGDKT VKLWDTTTGK EIKTLTGHTN1020
 1021 SVNGISFSPD GKMLASASGD KTVKLWDTTT GKEIKTLTGH TNSVNGISFS PDGKMLASAS1080
 1081 SDNTVKLWDT TTTGKKIKTL TGHTNSVNGI SFSPDGKMLA SASSDNTVKL WDTTTGKEIK1140
 1141 TLTGHTNWVY GISFSPDGKM LASASTDNTV KLWRLDFDYL LQKGCSFMRE YYKTNPPDNE1200
 1201 SDKHLCDGVG NL

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle