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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|186464164, gi...
Protein type: Transmembrane
Type Confidence: 0.73
Topology Confidence: 0.65
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRNFIKQTFA SLVGTLLGLI IFGGLGTTGL LLLIFAASSS KDTGPNVKDK SVLVFDLSMK  60
   61 ITDSEPSSDE LFQNTISGVD DERMALRKVV ETLEKARRDP RIVGIYLDST SASQAGNVGY 120
  121 ASLKEIRKAL EEFRASGKKI VAYGSDWSEK EYYLSSVADS IVLNPLGMME VNGLSSQPMF 180
  181 LAGALQKYGI GVQVVRVGKF KGAVEPFILK KLSPENREQT QKLLDDVWGE WRTTVGASRK 240
  241 IEPNQLQAIA DSQAVLEATQ AKTSGLVDRV AYPDEVVSDL KKLTNSDKDD KTFRQINLNN 300
  301 YAEVSGKSLG VERSSKNQIA VVYAEGEIVD GKGDGGQVGG DRFAKIFNKL RQDKDVKAVV 360
  361 LRINSPGGSA TAAEVMQREV KLTREVKPVV VSMGDVAASG GYWIASDSNR IFAEPNTITG 420
  421 SIGVFGLLFN GEKLASDNGI TWDSVKTGTY ADSQTVSRPK SPQELALYQR SVNRIYNMFL 480
  481 NKVSQGRKLP EQKVAEIAQG RVWSGVAAKE IGLVDEIGGL NSAIAYAVKE AKLGEDWEVQ 540
  541 EYPRTSSFGE RFFGRATEEA RTALGIEAAQ LKPSNPLTTE FQKLQQEVKI LQKMNDPQGV 600
  601 YARLPFNLKI E

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle