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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|53688220
Protein type: Globular with Signal Peptide
Type Confidence: 0.97
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MFLGFFLSLL LTFLPFSSNF INAATPTAVA PVSAVSFTQG VKKTVLDNGL TVLTKEVHTA  60
   61 PVVSVQVWYK VGSRNEVKGE NGISHQLEHL MFKGTTARPV QFGRLFSALG SQFNAFTSYD 120
  121 ETAYFGTVQR DRLEALLTLE ADRMENSLVG SEQLTSEKRV VISELQGYEN SPGYRLSRAV 180
  181 MRDAFPNRAY GLPVGGTKAD VEKFTVEQVR NYYQTYYSPE NATLVITGDF ATEPVLKVVK 240
  241 ETYGKLAKRS QQGNVRGNVA PSSPVAATTK KAPIVLKQPG SAALLQAVYP LPDIKHPDVP 300
  301 AIDVMDAILT GGRSSRLYQA LVESGLASSV SGGAAELIEP GWYEINATAA PGKELSKIAQ 360
  361 VLQESLGKLQ QQPVTTEELT RAKTQLQASY ILGNQDITSQ ATQLGYNQTI AGDYHFIEQY 420
  421 LAAIAKVTPA QVQKVAKTYL NPAKQTIGFF EPTQPDGKPG TSSAGSGRTV ENFSPGKPVD 480
  481 PAQLAKYLPP ATSATDSAKQ SLPEEFTLNN GLRVLLLRDR SLPTINLSGQ IDAGTEFDGN 540
  541 QKAGLANLTA ANLMNGTQTK NALTLAKTLE DLGADLSFSA SREGVNVSGE GLSKNLPILI 600
  601 QTLADVLENA TFPADQLELS RQRALTSLKV QLDDPRGLGR QVFQQAIYPE NHPFHSFPTF 660
  661 ESLKSISRDD LLGFYQKYYR PDSTTIAIVG DFDPVKVKTL LNQAFGKWQA TGKPPVLKIS 720
  721 SVPLPQTSTR LNKIIPGKAE AVTYIGYNGI SRKDPRYYAA LILNQILGGD TLSSRLGTEV 780
  781 RDRLGLTYGI YSGFAAGINP GPFLIQMQTA PGDTQKAIAS TLALLKQLRE QGVTEAEFNT 840
  841 AKRSLTNSYP VDLANPSNVS SIILDNAVLG LSRSEIRDFP QRIQAVTMAQ MQQAIEDLIK 900
  901 PENLVIVTAG PGETVPKGG

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle