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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|186682207, gi...
Protein type: Transmembrane
Type Confidence: 0.91
Topology Confidence: 0.42
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPSFTLQLSK LTKNVQLRHI LVVPFVLQIS LAVGLTGWLS IHNGQRAVNE VAIQLRNEIT  60
   61 ARIQQYLKVY VETPHKINQL NANAIKLGEL NIQKLSTLEQ HLWYQLKTFD TVTAVYVGSE 120
  121 YGEHVAVQRA DDGQFEVKLS GKSTGNEIRI YAADQPGHYT QLLRSKPNYD PRTRPWYQSA 180
  181 VKSKTASWGG IYKLFTTPKY VLNASLPIYD DGGNLLGVAA VDFSLTGISQ YLRTLKIGRT 240
  241 GETFILERQT GLLVGSSATQ QPYIIANSTA PIIDQNPVRV QAIASSDILT RRTADFLQQH 300
  301 FVDLTQITEK QQLDFDIEGQ RQFLQIVPMK QQGLDWLIVV VVPERDFMDQ INANTRSTIL 360
  361 LCLCAFALAT GLGILTAHWI TQPILRLGST AKAIAAGNLD QKVSVNSTTE LNSLAESFNL 420
  421 MAHQLRESFL ALARTNEELE SRVTQRTTEL GEKNAQLQRE IRVSEAAQRG RRQVEEALKT 480
  481 SEAELRLMFA AMTDMVVVFD AEGRYQKYVQ TKYVLTQSFA YKPDMDRIGK KVDEVLPKEI 540
  541 ANLILDAIQQ ALHLREEPRN PDGSRKNVFV EYHLSNKNRE TWFLASVSPL SDNTVLWVAR 600
  601 DITKLKKTEA ALKQAKETAD AANLAKSQFL SNMSHELRTP LNIILGFTQL LLRNRSLNSQ 660
  661 QQEYLDTINR SGEDLLTLIN DVLEMSKIEA GRVILSETNF DLYGLLDRLQ QMFALKAQSR 720
  721 GLQLILERSP TIPQYICADE SKLRQVLVNL LGNAIKFTRI GQVTLRVETP NQNITPDEPI 780
  781 TLNFSVEDTG CGIADSDFNR LFEPFVQTEA GQKAQEGTGL GLPISQRFVQ LMGGDIRVNS 840
  841 TLGKGSIFTF DIRTRAVIMD TLPTPAPSRQ VIGLEKGQPS YRILIVEDKL ENRQLLVELL 900
  901 TPVGFEVREA VNGQAAIELW QNWSPHLIWM DLRMPIMNGF EATKHIKAAG AQTPVIIALT 960
  961 GSAFEEDRLT ALSVGFDDFV RKPFRTTIIF EKMAEYLGVR YVYADEREKQ EKASWPSNAS1020
 1021 FITPKLTVAD LSVMPSDWIE QLHQAALRIN AKEILMLIKQ IPEQHAHLIV ALTNLVDCFC1080
 1081 FEEIIALGTT QKINDPKM

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle