YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|3688792
Protein type:	Globular with Signal Peptide
Type Confidence:	0.97
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MQKTPKKLTA LCHQKSTASC SGSNYSGSKC FRLHRLALLA CIVALPAYAY DGKVTFQGEI  60
   61 LSDGTCKIET DSKNRTVTLP TVGKANLRIA GQTAAPVPFS ITLKECSAVD AGKSALLFKG 120
  121 RAAGQSYLPN ATGHGKATNV GIQIVKADGT GTPIKVDGTE ANREKALDTG KAQNGAVIQH 180
  181 RFDYFARYYA TGAATAGDVE ATATFEVQYN

Type	Start	End	Confidence
Signal Peptide	1	49	0.97
N-region	1	40
H-region	41	46
C-region	47	49
Cleavage Site	49	50
Non-Cytoplasmic	50	210	0.99