YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	MTNA_NOSP7
Protein type:	Transmembrane
Type Confidence:	0.74
Topology Confidence:	0.67
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTLSTNHVYP VIWHNGAVSL IDQTRLPNEY TFVEIHRSED MARAIKTMIV RGAPAIGVAA  60
   61 AYGMYLGARE IETSDRHEFL QNLDKVAQLL GSTRPTAVNL FWAISRMMKV AKETLGTVED 120
  121 IKQTLFQTAQ AINVEDLQTC QAIGDNGLTV LPASPEKLTL LTHCNAGALA TAGYGTALGV 180
  181 VRSAWREGRL ERLFADETRP RLQGAKLTAW ECVQEGIPVT LITDNMAAHC MKQGLIHAVV 240
  241 VGADRIAANG DTANKIGTYS VAIAAKAHNI PFFVAAPLST VDFELADGSK IPIEERDPTE 300
  301 IYQVGDTILT PEGVDFYNPA FDVTPAELIT AIITENGAIA PGELVKLQLK QLV

Type	Start	End	Confidence
Cytoplasmic	1	46	0.70
Transmembrane Helix	47	66	0.67
Non-Cytoplasmic	67	353	0.90